New Approaches of Protein Function Prediction from Protein Interaction Networks

Written By Jingyu Hou
New Approaches of Protein Function Prediction from Protein Interaction Networks
  • Publsiher : Academic Press
  • Release : 13 January 2017
  • ISBN : 0128099445
  • Pages : 124 pages
  • Rating : 4/5 from 21 reviews
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Read or download book entitled New Approaches of Protein Function Prediction from Protein Interaction Networks written by Jingyu Hou which was release on 13 January 2017, this book published by Academic Press. Available in PDF, EPUB and Kindle Format. Book excerpt: New Approaches of Protein Function Prediction from Protein Interaction Networks contains the critical aspects of PPI network based protein function prediction, including semantically assessing the reliability of PPI data, measuring the functional similarity between proteins, dynamically selecting prediction domains, predicting functions, and establishing corresponding prediction frameworks. Functional annotation of proteins is vital to biological and clinical research and other applications due to the important roles proteins play in various biological processes. Although the functions of some proteins have been annotated via biological experiments, there are still many proteins whose functions are yet to be annotated due to the limitations of existing methods and the high cost of experiments. To overcome experimental limitations, this book helps users understand the computational approaches that have been rapidly developed for protein function prediction. Provides innovative approaches and new developments targeting key issues in protein function prediction Presents heuristic ideas for further research in this challenging area

New Approaches of Protein Function Prediction from Protein Interaction Networks

New Approaches of Protein Function Prediction from Protein Interaction Networks
  • Author : Jingyu Hou
  • Publisher : Academic Press
  • Release Date : 2017-01-13
  • Total pages : 124
  • ISBN : 0128099445
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Summary : New Approaches of Protein Function Prediction from Protein Interaction Networks contains the critical aspects of PPI network based protein function prediction, including semantically assessing the reliability of PPI data, measuring the functional similarity between proteins, dynamically selecting prediction domains, predicting functions, and establishing corresponding prediction frameworks. Functional annotation of proteins ...

Sequence based Protein Function Prediction

Sequence based Protein Function Prediction
  • Author : Brett Poulin
  • Publisher : Unknown
  • Release Date : 2004
  • Total pages : 180
  • ISBN : 0128099445
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Summary : Download or read online Sequence based Protein Function Prediction written by Brett Poulin, published by which was released on 2004. Get Sequence based Protein Function Prediction Books now! Available in PDF, ePub and Kindle....

Prediction of Protein Function Using Text Features Extracted from the Biomedical Literature

Prediction of Protein Function Using Text Features Extracted from the Biomedical Literature
  • Author : Andrew Wong
  • Publisher : Unknown
  • Release Date : 2013
  • Total pages : 166
  • ISBN : 0128099445
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Summary : Proteins perform many important functions in the cell and are essential to the health of the cell and the organism. As such, there is much effort to understand the function of proteins. Due to the advances in sequencing technology, there are many sequences of proteins whose function is yet unknown. ...

PROTEIN FUNCTION PREDICTION BA

PROTEIN FUNCTION PREDICTION BA
  • Author : Yatong An,{273a67}亚{275c28}
  • Publisher : Open Dissertation Press
  • Release Date : 2017-01-26
  • Total pages : 80
  • ISBN : 0128099445
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Summary : This dissertation, "Protein Function Prediction Based on Pocket-specific Noncontiguous Amino Acid Subsequences" by Yatong, An, {273a67}亚{275c28}, was obtained from The University of Hong Kong (Pokfulam, Hong Kong) and is being sold pursuant to Creative Commons: Attribution 3.0 Hong Kong License. The content of this dissertation has not been altered in ...

Protein Function Prediction for Omics Era

Protein Function Prediction for Omics Era
  • Author : Daisuke Kihara
  • Publisher : Springer Science & Business Media
  • Release Date : 2011-04-19
  • Total pages : 310
  • ISBN : 0128099445
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Summary : Gene function annotation has been a central question in molecular biology. The importance of computational function prediction is increasing because more and more large scale biological data, including genome sequences, protein structures, protein-protein interaction data, microarray expression data, and mass spectrometry data, are awaiting biological interpretation. Traditionally when a genome ...

Protein Function Prediction Methods and Protocols

Protein Function Prediction  Methods and Protocols
  • Author : Daisuke Kihara
  • Publisher : Methods in Molecular Biology
  • Release Date : 2019-05-12
  • Total pages : 252
  • ISBN : 0128099445
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Summary : Download or read online Protein Function Prediction Methods and Protocols written by Daisuke Kihara, published by Methods in Molecular Biology which was released on 2019-05-12. Get Protein Function Prediction Methods and Protocols Books now! Available in PDF, ePub and Kindle....

From Protein Structure to Function with Bioinformatics

From Protein Structure to Function with Bioinformatics
  • Author : Daniel John Rigden
  • Publisher : Springer Science & Business Media
  • Release Date : 2008-12-11
  • Total pages : 328
  • ISBN : 0128099445
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Summary : Proteins lie at the heart of almost all biological processes and have an incredibly wide range of activities. Central to the function of all proteins is their ability to adopt, stably or sometimes transiently, structures that allow for interaction with other molecules. An understanding of the structure of a protein ...

Protein Function Prediction from Protein Interaction Network

Protein Function Prediction from Protein Interaction Network
  • Author : Sovan Saha,Piyali Chatterjee
  • Publisher : LAP Lambert Academic Publishing
  • Release Date : 2013
  • Total pages : 148
  • ISBN : 0128099445
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Summary : Proteins perform every function in a cell. With the advent of genome sequencing projects for different organisms, large amounts of DNA and protein sequence data is available, whereas their biological function is still unknown in the most of the cases. Predicting protein function is the most challenging problem in post-genomic ...

Prediction of Protein Function and Functional Sites from Protein Sequences

Prediction of Protein Function and Functional Sites from Protein Sequences
  • Author : Jing Hu
  • Publisher : Unknown
  • Release Date : 2009
  • Total pages : 212
  • ISBN : 0128099445
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Summary : High-throughput genomics projects have resulted in a rapid accumulation of protein sequences. Therefore, computational methods that can predict protein functions and functional sites efficiently and accurately are in high demand. In addition, prediction methods utilizing only sequence information are of particular interest because for most proteins, 3-dimensional structures are not ...

Prediction of Protein Structures Functions and Interactions

Prediction of Protein Structures  Functions  and Interactions
  • Author : Janusz M. Bujnicki
  • Publisher : John Wiley & Sons
  • Release Date : 2008-12-23
  • Total pages : 302
  • ISBN : 0128099445
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Summary : The growing flood of new experimental data generated by genome sequencing has provided an impetus for the development of automated methods for predicting the functions of proteins that have been deduced by sequence analysis and lack experimental characterization. Prediction of Protein Structures, Functions and Interactions presents a comprehensive overview of ...

Protein Function Prediction by Integrating Sequence Structure and Binding Affinity Information

Protein Function Prediction by Integrating Sequence  Structure and Binding Affinity Information
  • Author : Huiying Zhao
  • Publisher : Unknown
  • Release Date : 2013
  • Total pages : 354
  • ISBN : 0128099445
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Summary : Proteins are nano-machines that work inside every living organism. Functional disruption of one or several proteins is the cause for many diseases. However, the functions for most proteins are yet to be annotated because inexpensive sequencing techniques dramatically speed up discovery of new protein sequences (265 million and counting) and experimental ...

Function Prediction from Protein Sequence and Protein Structure Comparison

Function Prediction from Protein Sequence and Protein Structure Comparison
  • Author : Harley Coleman
  • Publisher : Createspace Independent Publishing Platform
  • Release Date : 2017-01-30
  • Total pages : 38
  • ISBN : 0128099445
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Summary : Most commonly, protein function is inferred from the known functions of homologous proteins. For homologous proteins with easily recognizable sequence similarity, this type of prediction is based on the 'similar sequence-similar structure-similar function' paradigm. - Domains can be seen as 'units of evolution', and, therefore, both structural and functional similarity ...

Genome Wide Prediction and Analysis of Protein Protein Functional Linkages in Bacteria

Genome Wide Prediction and Analysis of Protein Protein Functional Linkages in Bacteria
  • Author : Vijaykumar Yogesh Muley,Vishal Acharya
  • Publisher : Springer Science & Business Media
  • Release Date : 2012-07-28
  • Total pages : 60
  • ISBN : 0128099445
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Summary : ​​ ​Using genome sequencing, one can predict possible interactions among proteins. There are very few titles that focus on protein-protein interaction predictions in bacteria. The authors will describe these methods and further highlight its use to predict various biological pathways and complexity of the cellular response to various environmental conditions. Topics ...

Computational Approaches to Predicting Protein Function from Structure

Computational Approaches to Predicting Protein Function from Structure
  • Author : Eric W. Stawiski
  • Publisher : Unknown
  • Release Date : 2001
  • Total pages : 240
  • ISBN : 0128099445
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Summary : Download or read online Computational Approaches to Predicting Protein Function from Structure written by Eric W. Stawiski, published by which was released on 2001. Get Computational Approaches to Predicting Protein Function from Structure Books now! Available in PDF, ePub and Kindle....

Protein Structure and Function Prediction

Protein Structure and Function Prediction
  • Author : Albion E. Baucom
  • Publisher : Unknown
  • Release Date : 2000
  • Total pages : 206
  • ISBN : 0128099445
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Summary : Download or read online Protein Structure and Function Prediction written by Albion E. Baucom, published by which was released on 2000. Get Protein Structure and Function Prediction Books now! Available in PDF, ePub and Kindle....