Annotating New Genes

Written By Shizuka Uchida
Annotating New Genes
  • Publsiher : Elsevier
  • Release : 06 August 2012
  • ISBN : 1908818123
  • Pages : 196 pages
  • Rating : 4/5 from 21 reviews
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Read or download book entitled Annotating New Genes written by Shizuka Uchida which was release on 06 August 2012, this book published by Elsevier. Available in PDF, EPUB and Kindle Format. Book excerpt: In recent years, a number of academic and commercial software packages and databases have been developed for the analysis and screening of biological data; however, the usability of these data is compromised by so-called novel genes to which no biological function is assigned. Annotating new genes outlines an approach to the analysis of evolutionary-conserved, heart-enriched genes with unknown functions, offering a step-by-step description of the procedure from screening to validation. The book begins by offering an introduction to the databases and software available, before moving on to cover programming guidelines, including a specific case study on the use of C-It for in silico screening. The second half of the book offers a step-by-step guide to experimental validation concepts and procedures, as well as an overview of additional potential applications of this approach in the field of stem cells and tissue regeneration, before a concluding chapter summarises the concepts and theories presented. Focuses not only on screening but also on biological validations Provides details of databases and software (web interface) products for biologists with minimal computation skills Offers a step-by-step outline of the procedure involved

Annotating New Genes

Annotating New Genes
  • Author : Shizuka Uchida
  • Publisher : Elsevier
  • Release Date : 2012-08-06
  • Total pages : 196
  • ISBN : 1908818123
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Summary : In recent years, a number of academic and commercial software packages and databases have been developed for the analysis and screening of biological data; however, the usability of these data is compromised by so-called novel genes to which no biological function is assigned. Annotating new genes outlines an approach to ...

An Integrated Approach to Enhancing Functional Annotation of Sequences for Data Analysis of a Transcriptome

An Integrated Approach to Enhancing Functional Annotation of Sequences for Data Analysis of a Transcriptome
  • Author : Matthew Morritt Hindle
  • Publisher : Unknown
  • Release Date : 2012
  • Total pages : 212
  • ISBN : 1908818123
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Summary : Given the ever increasing quantity of sequence data, functional annotation of new gene sequences persists as being a significant challenge for bioinformatics. This is a particular problem for transcriptomics studies in crop plants where large genomes and evolutionarily distant model organisms, means that identifying the function of a given gene ...

Genome Annotation

Genome Annotation
  • Author : Jung Soh,Paul M.K. Gordon,Christoph W. Sensen
  • Publisher : CRC Press
  • Release Date : 2016-04-19
  • Total pages : 270
  • ISBN : 1908818123
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Summary : The success of individualized medicine, advanced crops, and new and sustainable energy sources requires thoroughly annotated genomic information and the integration of this information into a coherent model. A thorough overview of this field, Genome Annotation explores automated genome analysis and annotation from its origins to the challenges of next-generation ...

Modern Genome Annotation

Modern Genome Annotation
  • Author : D. Frishman,Alfonso Valencia
  • Publisher : Springer Science & Business Media
  • Release Date : 2009-10-02
  • Total pages : 490
  • ISBN : 1908818123
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Summary : An accurate description of current scientific developments in the field of bioinformatics and computational implementation is presented by research of the BioSapiens Network of Excellence. Bioinformatics is essential for annotating the structure and function of genes, proteins and the analysis of complete genomes and to molecular biology and biochemistry. Included ...

Functional Annotation of Farm Animal Genomes

Functional Annotation of Farm Animal Genomes
  • Author : Hans Cheng,Amanda Jane Chamberlain,Elisabetta Giuffra,Christa Kuehn,Christopher K. Tuggle,Huaijun Zhou
  • Publisher : Frontiers Media SA
  • Release Date : 2021-12-20
  • Total pages : 212
  • ISBN : 1908818123
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Summary : Download or read online Functional Annotation of Farm Animal Genomes written by Hans Cheng,Amanda Jane Chamberlain,Elisabetta Giuffra,Christa Kuehn,Christopher K. Tuggle,Huaijun Zhou, published by Frontiers Media SA which was released on 2021-12-20. Get Functional Annotation of Farm Animal Genomes Books now! Available in PDF, ePub ...

IMG ER

IMG ER
  • Author : Anonim
  • Publisher : Unknown
  • Release Date : 2009
  • Total pages : 212
  • ISBN : 1908818123
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Summary : A rapidly increasing number of microbial genomes are sequenced by organizations worldwide and are eventually included into various public genome data resources. The quality of the annotations depends largely on the original dataset providers, with erroneous or incomplete annotations often carried over into the public resources and difficult to correct. ...

Database Annotation in Molecular Biology

Database Annotation in Molecular Biology
  • Author : Arthur M. Lesk
  • Publisher : John Wiley & Sons
  • Release Date : 2005-09-01
  • Total pages : 266
  • ISBN : 1908818123
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Summary : Two factors dominate current molecular biology: the amount of raw data is increasing very rapidly and successful applications in biomedical research require carefully curated and annotated databases. The quality of the experimental data -- especially nucleic acid sequences -- is satisfactory; however, annotations depend on features inferred from the data ...

Evolution of Fungi and Fungal Like Organisms

Evolution of Fungi and Fungal Like Organisms
  • Author : Stefanie Pöggeler,Johannes Wöstemeyer
  • Publisher : Springer Science & Business Media
  • Release Date : 2011-07-28
  • Total pages : 345
  • ISBN : 1908818123
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Summary : Based on sequence analyses of many different genes, the past decade has provided us with a profound knowledge of fungal systematics and phylogeny. In addition, a number of sequences of complete fungal genomes have been identified and several others will soon follow. In this volume, leading experts address questions concerning ...

Graph Drawing

Graph Drawing
  • Author : David Eppstein,Emden R Gansner
  • Publisher : Springer
  • Release Date : 2010-03-10
  • Total pages : 426
  • ISBN : 1908818123
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Summary : This volume constitutes the refereed proceedings of the 17th International Symposium on Graph Drawing, GD 2009, held in Chicago, USA, during September 2009. The 31 revised full papers and 4 short papers presented were carefully reviewed and selected out of 79 submissions. Furthermore, 10 posters were accepted in a separate submission process....

Challenges in Whole Genome Annotation of Pyrosequenced Eukaryotic Genomes

Challenges in Whole Genome Annotation of Pyrosequenced Eukaryotic Genomes
  • Author : Anonim
  • Publisher : Unknown
  • Release Date : 2009
  • Total pages : 212
  • ISBN : 1908818123
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Summary : Pyrosequencing technologies such as 454/Roche and Solexa/Illumina vastly lower the cost of nucleotide sequencing compared to the traditional Sanger method, and thus promise to greatly expand the number of sequenced eukaryotic genomes. However, the new technologies also bring new challenges such as shorter reads and new kinds and higher ...

The Genome of Homo Sapiens

The Genome of Homo Sapiens
  • Author : David Stewart,Bruce Stillman
  • Publisher : CSHL Press
  • Release Date : 2003
  • Total pages : 512
  • ISBN : 1908818123
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Summary : The Human Genome Project was completed in 2003, 50 years after the discovery of the structure of DNA and 17 years after an influential debate at the annual Cold Spring Harbor Laboratory Symposium about the Project's feasibility. The 2003 Symposium was dedicated to examining what has been learned so far from the human genome ...

Literature based Discovery

Literature based Discovery
  • Author : Peter Bruza,Marc Weeber
  • Publisher : Springer Science & Business Media
  • Release Date : 2008-08-17
  • Total pages : 198
  • ISBN : 1908818123
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Summary : This is the first coherent book on literature-based discovery (LBD). LBD is an inherently multi-disciplinary enterprise. The aim of this volume is to plant a flag in the ground and inspire new researchers to the LBD challenge....

Gene therapy

Gene therapy
  • Author : Surendra Nimesh
  • Publisher : Elsevier
  • Release Date : 2013-10-31
  • Total pages : 380
  • ISBN : 1908818123
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Summary : Gene therapy is emerging as a new class of therapeutics for the treatment of inherited and acquired diseases. However, poor cellular uptake and instability of DNA in the physiological milieu limits its therapeutic potential, hence a vector which can protect and efficiently transport DNA to the target cells must be ...

Biodata Mining And Visualization Novel Approaches

Biodata Mining And Visualization  Novel Approaches
  • Author : Havukkala Ilkka
  • Publisher : World Scientific Publishing Company
  • Release Date : 2010-06-23
  • Total pages : 324
  • ISBN : 1908818123
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Summary : There is a lack of an exposition on interdisciplinary and innovative methods of data mining and visualization for biodata. This book fills the gap by introducing an interdisciplinary set of the most recent methods and references on novel techniques from artificial intelligence, data mining, engineering, pattern recognition, and ontological data ...

Genome Annotation and Finding Repetitive DNA Elements

Genome Annotation and Finding Repetitive DNA Elements
  • Author : Renu Rawat
  • Publisher : Unknown
  • Release Date : 2014-06-03
  • Total pages : 44
  • ISBN : 1908818123
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Summary : Bachelor Thesis from the year 2014 in the subject Computer Science - Bioinformatics, grade: 8.26, Lovely Professional University, course: b.tech honors biotechnology, language: English, abstract: As the number of genomes sequenced is increasing at high rate, there is a need of gene prediction method which is quick, reliable, inexpensive. In such ...